Introduction
- China's NCBI - a dream? (Luo JC, CBI) [PDF]
- My View on Bioinformatics (Luo JC, CBI) [PDF]
- Bioinformatics Databases(Luo JC, CBI) [PDF]
- Genome Information Resource (Luo JC, CBI) [PDF]
Invited Lectures
- Yiming Bao (Beijing Insttute of Genomics) - NCBI and China's NCBI. [PDF]
- Xiao Xu (Peking University) - The genetic basis of white tigers. [PDF]
- Yang Zhong (Fudan University) - Horizontal gene transfer: from phylogenetic prediction to experimental validation. [PDF]
Summary about ABC
- Lu P - A summary to the ABC by Li P (CAAS15F) [PDF]
UNIX and EMBOSS
BLAST and database search
- BLAST - Luo JC (CBI) [PDF] | Tian YL (CAAS06F) [PDF] | Xie C (PKU08S1) [PDF] | Bian Y (PKU08S1) [PDF] | Xu GX (PKU09S3) [PDF] | Liu H (CAAS09S3) [PDF] | Kang YJ (pku13f) [PDF] | Jiang S (pku14f) [PDF] | Kuang C (caas16f) [PDF]
- Database search - Gao G (CBI) [PDF]
- Multiple sequence alignment - Liu K (PKU07S) [PDF]
- Scoring Matrix - Yuan YX (PKU07S) [PDF]
Primer Design
Resources
- PubMed - Huang LY (CAAS07F) [PDF] | Gao YZ (CAAS09S2) [PDF] | Luo JC (CBI) [PDF]
- NCBI Databases - Li L (CAAS07F) [PDF]
- ExPASy - Gong JY (CAAS07F) [PDF] | Ren J (CAAS09S2) [PDF]
- PDB - Gao HB (CAAS07F) [PDF]
- SRS - Luo JC (CBI) [PDF] | Yan Ll (CAAS08S) [PDF] | Huang BY (CAAS07F) [PDF]
- Text Mining - Wang X (CAAS07F) [PDF]
- WebLab - wang J (CBI) [PDF]
Phylogeny
- MEGA - Hu YP (CAAS06F) [PDF]
- Phylogeny - Gao G (CBI) [PDF] | Huang BY (CAAS07F) [PDF] | Li Z (CBI) [PDF] | Shi XL (CBI) [PDF] | Zhu HW (CAAS07F) [PDF] | Li J (PKU08S) [PDF] | Yang Q (PKU08S) [PDF] | Sun TS (PKU12f) [PDF] | Jiang CK (PKU14F) [PDF] | Yang JX (PKU19S) [PDF] | Sun TS (2020) [PDF]
Molecular modeling
- 3D modeling - Ye ZQ (CBI) [PDF] | Zhu HW (CAAS07F) [PDF] | Wang JL (CAAS08S) [PDF]
- 3D of Transcription Factors - Luo JC (CBI) [PDF]
- Swiss PDB Viewer - Mao SL (BBT20G04) [PDF] | Zhang J (CAAS08S) [PDF] | Li W (CAAS07F) [PDF]
- PyMol - Zhang WB (PKU13F) [PDF] [Map] | Zhou QF (PKU14F) [PDF] [Map] | Yi YP (CAAS15PhD) [PDF] | Wang Y (PKU16F) [PDF] | Liu F (PKU19F) [PDF]
Omics data analysis
- Cucumber genome assembly - Li HB (CAAS17MS) [PDF]
Projects
- HB (Hemoglobin) - Li WQ (PKU07S) [PDF] | Li QC (CAAS08F) [PDF]
- CEA (Caecinoembrionic Antigene) - Wang Q (CAAS07F) [PDF]
- MDR (Fugu Multidrug Resistance Gene)- Xu LM (PKU08S1) [PDF]
- SBP (Squmosa promoter Binding Protein) - Guo AY (CBI) [PDF]
- LEC1 (Arabidopsis CCAAT-HAP3 TF family) - Xu LM (CBI)[PDF]
- Rice (Rice Genome Domestication) - Zhu QH (CBI) [PDF]
- CA3 (Carbonic Anhydrase) - Hou XH (CAAS07F) [PDF]
- PhyB (Soybean phyB Gene) - Wu FQ (CAAS07F) [PDF]
- P53 ( Tumor Protein 53) - Shen Y (CAAS07F) [PDF]
- GP120 (HIV glycoprotein 120) - ma JN (CAAS08s) [PDF]
- EIN (Ethylene Insensitive Proteins) - He WR (PKU08S1) [PDF]
- NG (Neurogenin) - Liamg W (PKU08S1) [PDF]
- OPHC2 (Organophosphorus Hydrolase precursor) - Lu H (CAAS08S) [PDF]
- R-Gene (Potato R gene) - Qu D (CAAS08S) [PDF]
- PEAT1 (Protein Elicitor from Alternaria Tenuissima) - Yin FS (CAAS08S) [PDF]
- GCR2 (G protein coupled receptor in plants) - Liu BC (PKU09S2) [PDF]
- T2R (Bitter taste receptor) - Xiong MY (PKU13S) [PDF]
All the PDF file of the above talks can be downloaded freely for teaching. The copyright belongs to the original authors.