Phylogeny
Phylogenetic analysis and construction of phylogenetic tress with simple
examples.
Protein
- Construct a phylogentic tree for 12 human globins
[12 Globins]
- Construct a phylogentic tree for 7 alpha hemoglobins
[7HBA]
- Construct a phylogentic tree for 16 alpha hemoglobins
[16HBA]
- Construct a phylogentic tree for 22 alpha hemoglobins
[22HBA]
- Construct phylogentic trees selecting representative sequences from
208HBA
based on the taxonomy table
[208HBA.pdf]
- Construct a phylogentic tree for 10 Rhodopsins
[10 OPSD]
- Construct a phylogentic tree for a segment of lysine/histidine transporter
from 10 plants
[10 LHT]
- Construct a phylogentic tree for the DNA binding domain of 15 Arabidopsis
SBP proteins
[15 SBPD]
- Construct a phylogentic tree for the full length of 15 Arabidopsis
SBP proteins
[15 SBP]
DNA
- Construct phylogentic trees with different methods and parameters for a
set of 6 test DNA sequences
[6 DNA]
- Construct a phylogentic tree for the SNPs of 20 SARS coronaviruses
[20 SARS]
- Construct a phylogentic tree for 8 Hemoglobin alpha coding sequences
[8 HBA_CDS]
- Construct a phylogentic tree for 16 Hemoglobin alpha coding sequences
[16 HBA_CDS]
- Construct a phylogentic tree for 37 human, mouse and rat globin coding
sequences
[37 GLOBIN_CDS]