SpliceView Output for fragment 1 (1-10100)

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Acceptor sites

Donor sites

ID   FRAG1               
XX
OS   Homo sapiens
XX
CC   direct strand
XX
SQ   10100 bp
XX
CC   Potential splice signals:
 
DONOR SITES:
POSITION        EXON INTRON    SCORE
     204         AGA GTGAGA      81.
     212         AAG GTGAGA      89.
     284         CAG GTGGTG      80.
     552         TGT GTAAGA      76.
     802         AAG GTGTGG      83.
    1138         TGG GTGAGT      88.
    1282         TTC GTGAGG      73.
    1791         CAG GTACTC      78.
    1830         TAA GTGAGC      82.
    2152         GAG GTAGGT      85.
    2380         TTG GTAAGA      85.
    2715         TTG GTGAGA      80.
    2781         CCA GTGAGT      86.
    2810         CAA GTGAGA      83.
    2891         GAG GTACGT      84.
    3023         CAG GTATTT      82.
    3377         CCT GTGCGT      77.
    3513         CTG GTAGTG      77.
    3620         CTG GTATGA      81.
    3665         AGA GTGGGT      81.
    3919         ACA GTAAGG      77.
    3924         AAG GTAAAT      85.
    4198         GAG GTGCTA      76.
    4257         AAG GTGAGT      93.
    4493         CTG GTACGG      83.
    4548         ACT GTGAGT      82.
    4617         CAC GTGTGT      78.
    4633         AAG GTGTTC      76.
    4747         CAC GTGAGT      85.
    5153         GCG GTAACT      79.
    5662         AAG GTGACA      81.
    5718         AAA GTATGT      80.
    5828         CAT GTGAGG      85.
    5874         GTG GTAAAA      80.
    5930         TCC GTAAGT      77.
    5954         GAA GTATGT      77.
    5990         AGG GTATTG      73.
    6008         CAG GTGTGA      82.
    6010         GGT GTGAGA      78.
    6045         ACA GTAGGT      79.
    6049         TAG GTGCAC      75.
    6076         GAG GTGAAG      82.
    6246         CAC GTGTGT      79.
    6320         GTG GTCAGC      78.
    6458         GAC GTGAGG      81.
    6713         AAG GTACAG      80.
    6942         CCC GTGAGG      79.
    7252         CAG GTATCC      76.
    7277         GAC GTGCGT      77.
    7538         GAG GTGAGC      88.
    7598         ACA GTGAGA      79.
    7705         CTG GTACTC      72.
    7718         CCA GTGTGT      76.
    7824         TTG GTAGGA      78.
    8206         AAG GTCAGA      81.
    8222         TTG GTAAAC      75.
    8357         TAG GTGTTG      74.
    8431         GAT GTGAGT      85.
    8461         AAG GTGCTA      78.
    8857         GAA GTGAGG      82.
    8863         AGG GTAAAC      79.
    8870         ACA GTAGGT      79.
    9295         CAG GTGAGT      92.
    9299         TGA GTGAGA      74.
    9429         AAG GTGCCG      77.
    9579         CTG GTACGA      79.
    9652         GGA GTAAGT      81.
    9973         GAT GTGAGA      80.
   10054         AAT GTGAGA      86.
 
ACCEPTOR SITES:
POSITION        INTRON EXON    SCORE
      66     TCTGAGCAG AGAT      79.
     285     TGTGTCCAG GTGG      86.
     294     GTGGTGCAG GAGG      77.
     363     ACCATCCAG AACG      83.
     390     GTGTTCCAG GGAG      83.
     538     GCAATCCAG TTTA      78.
     640     GCTTCATAG TTCA      79.
     670     CCTCTTTAG CTCA      83.
     675     TTAGCTCAG ACGA      84.
     786     TTTTCTGAG GAGC      83.
     859     TTTTCTCAG TATT      86.
     955     TCCTGGCAG ATCA      81.
    1077     GCCATTCAG ACAT      81.
    1130     ATCTACTAG AACT      77.
    1197     CTCCCTAAG CTCA      77.
    1316     GTTCTTCAG CAGT      81.
    1319     CTTCAGCAG TCAC      79.
    1688     GTGCTTCAG ATAA      80.
    1695     AGATAACAG GGTC      77.
    1787     AGATTACAG AGCA      80.
    1807     ACCCCACAG GACT      81.
    1852     CTTCTTAAG ATTA      82.
    1895     CTACTGCAG GGGA      81.
    1938     TCTACGCAG CCTT      84.
    1945     AGCCTTTAG TGTT      77.
    1971     TTTTGTCAG GGTC      81.
    2022     TGTCTTAAG ATCC      78.
    2311     CTCCTGTAG TGAC      77.
    2442     TTATTGTAG TTGT      78.
    2556     TCCACATAG CCCC      77.
    2629     GGTTTGCAG ATGG      83.
    2742     TTCATCCAG GAAG      79.
    2797     GTTCCTCAG CTGA      79.
    2858     TTACTCTAG GAGC      83.
    2964     CATCTGTAG ATAA      81.
    3024     ACCTCACAG GTAT      78.
    3189     CCATCATAG TGGT      79.
    3231     GTTCTTCAG TCTC      80.
    3249     GATGTCCAG GAAA      77.
    3345     CATCACCAG CCTC      79.
    3353     GCCTCTCAG CAGG      78.
    3434     CTTACCTAG CCGA      82.
    3474     ATTTTTTAG ATTC      83.
    3532     TACCTGCAG ATGT      78.
    3607     ATCATGCAG CAGG      77.
    3665     GTCTCACAG AGTG      80.
    3707     CTGTCACAG CTGG      83.
    3808     CTGATCCAG GCGG      77.
    3888     GGCCATCAG CCCT      79.
    3908     GTCTCTCAG CTGC      82.
    3921     CCTTTACAG TAAG      84.
    4066     CATCCATAG ACAC      79.
    4133     GCCCCATAG TTGC      79.
    4216     CTCCATCAG GACT      81.
    4234     TGCCTTCAG TGGC      81.
    4286     TTACCTTAG ATTA      77.
    4377     GTTCCTCAG ATAT      90.
    4448     CGGCCACAG GCTT      77.
    4586     ACCATTAAG AATA      77.
    4694     AACGTCCAG TCCT      78.
    4705     CTTTGCCAG TGCC      79.
    4711     CAGTGCCAG AGGA      79.
    4928     TAATTTCAG GCTG      84.
    4945     TGTTTACAG TTAC      78.
    5260     CTTTCATAG TTTC      85.
    5302     TCTTTCCAG GAAT      93.
    5608     TCTCAACAG AAAC      82.
    5633     GCTTTTCAG AGGA      77.
    5694     CCACTTCAG CTAC      77.
    5741     CCATCACAG TTTT      80.
    5805     CATCCGCAG ATCT      89.
    5904     CTGCTGCAG AGGT      81.
    5922     GACCCCCAG AAAG      78.
    5990     ATTTGGCAG GGTA      80.
    6009     TTATTCCAG GTGT      80.
    6047     CATTGACAG TAGG      77.
    6132     TTCATTCAG ATTT      77.
    6457     ACCTTCCAG ACGT      81.
    6826     AGCCCACAG AAGC      77.
    6838     CCCTCCCAG AGCC      77.
    6979     TTAGTGCAG CTTA      79.
    6990     TATTTTCAG GTCT      83.
    6999     GTCTCCCAG CTTC      84.
    7015     TTCATCCAG GTCT      84.
    7091     TCTCTACAG GTCC      85.
    7144     GACCATCAG AAAC      79.
    7253     ACCATGCAG GTAT      78.
    7344     CTGCTACAG AGCT      87.
    7431     TTCTCCCAG TCCT      82.
    7443     TCCCTGCAG AGGA      90.
    7445     CCTGCAGAG GAGG      77.
    7483     CTGTCTCAG AAGG      86.
    7486     TCTCAGAAG GAAC      80.
    7591     CAGATTCAG ACTT      77.
    7632     CCTTTATAG GTCT      78.
    7720     CTTTCCCAG TGTG      84.
    7732     GTAACACAG CTTC      77.
    7753     TTTCTGCAG GATG      85.
    7787     TCTTTAAAG TGAT      81.
    7942     TGTTTTCAG CGTT      88.
    7952     GTTTGTCAG CTAA      79.
    7979     GAATTTCAG GTCT      83.
    7987     GGTCTTCAG AGAA      79.
    8084     TTTCTGCAG GTTT      88.
    8262     TCCTGTCAG CACA      78.
    8273     CATTTCTAG AGGC      78.
    8450     CCTTTCCAG CAGA      85.
    8453     TTCCAGCAG ATCC      87.
    8532     ATGTTCCAG AAGA      81.
    8811     GGCCGGCAG CAAC      78.
    8851     CCCACTAAG GCTT      79.
    8948     CCTTCCAAG GGAC      80.
    8977     TCTACCCAG ATGG      87.
    9065     CTTCATCAG AGAG      84.
    9203     TCTAAACAG TTTT      80.
    9218     GGTTTCCAG GGTT      81.
    9232     CTGTTTCAG TAAA      81.
    9265     GAACCTCAG ACTC      79.
    9347     TTGAAACAG GAGC      79.
    9470     CACATGCAG ATCA      82.
    9569     GTATTGAAG GACC      81.
    9622     CACCACTAG GCTG      80.
    9726     TCTGCTCAG GCTG      85.
    9733     AGGCTGCAG GGGT      85.
   10031     TCCCTGCAG ATCG      89.
   10041     TCGCCACAG AGGC      80.
   10081     CCTCACCAG AGAA      82.

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Last modified: Tue 1 June 1999, [email protected]