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CLUSTAL W(1.60) multiple sequence alignment (To be checked)

FUGU1_MDR - Fragment 1-14000
FUGU2_MDR - Fragment 12000-26000 (2000 bp overlaps with FUGU1_MDR)

MDR1_FUGU - Fragment 1-12390
MDR3_FUGU - Fragment 123711-23075 (20 bp overlap with MDR1_FUGU)

All the AA sequence are WebGene out put, not checked carefully.
 

My guess:

1                                                                                              39551
=====================================================================================================
 ^^^                           ^^^                             ^^^
 Repaet1                       Repaet 2                        Repeat 3
     |----------------------------| |------------------------------| |------------------------------|
                MDR1                          MDR3                      Unknown
Pls check
FUGU1_MDR_      ------------------------------------------------------------
FUGU2_MDR_      LLDGVDVKQLNVHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRSVSMDEIVAAAKAANI
MDR1_FUGU_      ------------------------------------------------------------
MRD3_FUGU_      ------------------------------------------------------------
MDR1_HUMAN      ------------------------------------------------------------
MDR1_LEIEN      ---------------------------------------------------------MSR
MDR1_MOUSE      ------------------------------------------------------------
MDR1_RAT_       ------------------------------------------------------------
MDR1_CRIGR      ------------------------------------------------------------
MDR1_CAEEL      ----------------------------------------------------MLRNGSLR
MDR3_HUMAN      ------------------------------------------------------------
MDR3_MOUSE      ------------------------------------------------------------
MDR3_CRIGR      ------------------------------------------------------------
MDR3_CAEEL      ------------------------------------------------------------
                                                                            

FUGU1_MDR_      ---------RYDTQAGDKGTQLSGGQ---KQRVAIARAIIRNPKLLLLDEATSALDTESE
FUGU2_MDR_      HSFIEGLPQRYDTQAGDKGTQLSGGQ---KQRVAIARAIIRNPKLLLLDEATSALDTESE
MDR1_FUGU_      ---------RYDTQAGDKGTQLSGGQ---KQRVAIARAIIRNPKLLLLDEATSALDTENG
MRD3_FUGU_      ---------RYDTQAGDKGTQLSGGQ---KQRVAIARAIIRNPKLLLLDEATSALDTERL
MDR1_HUMAN      ----------MDLEGDRNGGAKK------KNFFKLNNKSEKDKK--EKKPTVSVFSMFRY
MDR1_LEIEN      AHAAYANEGWSAPEGGIAGKDGSTRDCSGYGSQGPLFSAEEEVKGTVVRETVGPIEIFRY
MDR1_MOUSE      ----------MEFEENLKG-RAD------KNFSKMGKKSKKEKK--EKKPAVGVFGMFRY
MDR1_RAT_       ----------MEFEEGLNG-RAD------KNFSKMGKKSKKEK---EKKPAVGIFGMFRY
MDR1_CRIGR      ----------MEFEEDFSG-RKD------KNFLKMGRKSKKEKK--EKKPVVSVFTMFRY
MDR1_CAEEL      QSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRY
MDR3_HUMAN      ----------MDLEAAKNGTAWRPTSA--EGDFELGISSKQKRKKTKTVKMIGVLTLFRY
MDR3_MOUSE      ----------MELEEDLKG-RAD------KNFSKMGKKSKKEKK--EKKPAVSVLTMFRY
MDR3_CRIGR      ----------MDLEAARNGTARRPGTV--EGDFELGSISNQGRNKKKKVNLIGPLTLFRY
MDR3_CAEEL      ----------------MKKTKVNP-----EDDITLGKFTPKPSP--QDSYQGNFFDVFRD
                                                                            

FUGU1_MDR_      KVVQEALDQAR-------------------------------------------------
FUGU2_MDR_      KVVQEALDQAR---------KGRTCIVVAHRLSTIQNADCIAVFQGGVVFRFADRWDVVL
MDR1_FUGU_      ----WDILMVT-------------------------------------------------
MRD3_FUGU_      SIMALKIDTAETNGDLSHDSKDDGAKNEKKKKNKKEKPPQEPMVGPITLFRFADRWDVVL
MDR1_HUMAN      SNWLDKLYMVV-------------------------------------------------
MDR1_LEIEN      ADATDRVLMIA-------------------------------------------------
MDR1_MOUSE      ADWLDKLCMIL-------------------------------------------------
MDR1_RAT_       ADWLDKLCMAL-------------------------------------------------
MDR1_CRIGR      AGWLDRLYMLV-------------------------------------------------
MDR1_CAEEL      TTTLEKLLLFI-------------------------------------------------
MDR3_HUMAN      SDWQDKLFMSL-------------------------------------------------
MDR3_MOUSE      AGWLDRLYMLV-------------------------------------------------
MDR3_CRIGR      SDWQDKLFMLL-------------------------------------------------
MDR3_CAEEL      ADYKDYILFSG-------------------------------------------------
                      .                                                     

FUGU1_MDR_      --KGRTCIVVAHRLSTIQNADCIAVFQGGVVEAKLSQNHNTSN---------PSECSSAE
FUGU2_MDR_      LISGTVMAMVNGTVMPLMCIVFGEMTDSFIYADMAQHNASGWNS--------TTTILNST
MDR1_FUGU_      --IGVLMAIVNGLVNPLMCIVFGEMTDSFIQEAKLSQNHNTSN---------PTEFGYSN
MRD3_FUGU_      LISGTVMAMVNGTVMPLMCIVFGEMTDSFIYADMAQHNASGWNS--------TTTILNST
MDR1_HUMAN      ---GTLAAIIHGAGLPLMMLVFGEMTDIFA--NAGNLEDLMSNITNRSDINDTGFFMN--
MDR1_LEIEN      ---GTAFAVACGAGMPVFSFIFGRIAMDLMS-------------------------GVGS
MDR1_MOUSE      ---GTLAAIIHGTLLPLLMLVFGNMTDSFT-KAEASILPSITN---QSGPNSTLIISNSS
MDR1_RAT_       ---GTLAAIIHGTLLPLLMLVFGYMTDSFTPSRDPHSDRAITN---QSEINSTHTVSDTS
MDR1_CRIGR      ---GTLAAIIHGVALPLMMLVFGDMTDSFA--SVGNIPTNATNN--ATQVNASDIFGK--
MDR1_CAEEL      ---GTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLP------TGQNYTKTD
MDR3_HUMAN      ---GTIMAIAHGSGLPLMMIVFGEMTDKFVD--------TAGNFSFPVNFSLSLLNPGKI
MDR3_MOUSE      ---GTLAAIIHGVALPLMMLIFGDMTDSFA--SVGNVSKNSTN---MSEADKRAMFAK--
MDR3_CRIGR      ---GTIMAIAHGSGLPLMMIVFGEMTDKFVN--------NAGNFSLPVNFSLSMINPGRI
MDR3_CAEEL      ---GLILSAVNGALVPFNSLIFEGIANALME-----GESQYQN----------GTINMPW
                   *                    .                                   

FUGU1_MDR_      EHQIMTGEQLLNQGQ---IFFNKTSQMSLWTLTAARQAKRIRELFFHGIMQQDISWYDVT
FUGU2_MDR_      LQEDMQRFAIYYSVLGFVVLLAAYMQVSFWTITAGRQVKRIRSLFFHCIMQQEIS-----
MDR1_FUGU_      LQPLFFRFSIYYSILGFAVLVVAYLQMSLWTLTAARQAKRIRELFFHGIMQQDISWYDVT
MRD3_FUGU_      LQEDMQRFAIYYSVLGFVVLLAAYMQVSFWTITAGRQVKRIRSLFFHCIMQQEISWFDVN
MDR1_HUMAN      LEEDMTRYAYYYSGIGAGVLVAAYIQVSFWCLAAGRQIHKIRKQFFHAIMRQEIGWFDVH
MDR1_LEIEN      AEEKAAKTSLIMVYVGIAMLIACAGHVMCWTVAACRQVARIRLLFFRAVLRQDIGWHDEH
MDR1_MOUSE      LEEEMAIYAYYYTGIGAGVLIVAYIQVSLWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH
MDR1_RAT_       LEEDMAMYAYYYTGIGAGVLIVAYIQVSLWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVN
MDR1_CRIGR      LEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH
MDR1_CAEEL      FEHDVMNVVWSYAAMTVGMWAAGQIIVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN
MDR3_HUMAN      LEEEMTRYAYYYSGLGAGVLVAAYIQVSFWTLAAGRQIRKIRQKFFHAILRQEIGWFDIN
MDR3_MOUSE      LEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH
MDR3_CRIGR      LEEEMTRYAYYYSGLGGGVLVAAYIQVSFWTLAAGRQIKKIRQNFFHAILRQEMGWFDIK
MDR3_CAEEL      FSSEIKMFCLRYFYLGVALFLCSYFANSCLYTLCERRLHCIRKKYLKSVLRQDAKWFDET
                                  .              . .    .*  . . .. *.       

FUGU1_MDR_      ETGELNTRLTEWVTHIIHTPVPVTAGVVVIICGVRFPGAHDVYKIQEGIGDKAGLLIQAA
FUGU2_MDR_      ---------------------------------------CDVYKIQEGIGDKVGLLIQAY
MDR1_FUGU_      ETGELNTRLTEWVTHIIHTPVPVTAGVVVIICGVRFPGAHDVYKIQEGIGDKAGLLIQAA
MRD3_FUGU_      DTGELNTRL-----------------------------TDDVYKIQEGIGDKVGLLIQAY
MDR1_HUMAN      DVGELNTRLT-----------------------------DDVSKINEGIGDKIGMFFQSM
MDR1_LEIEN      SPGALTARMT-----------------------------GDTRVIQNGINDKLSQGIMNG
MDR1_MOUSE      DVGELNTRLT-----------------------------DDVSKINDGIGDKIGMFFQSI
MDR1_RAT_       DAGELNTRLT-----------------------------DDVSKINDGIGDKLGMFFQSI
MDR1_CRIGR      DVGELNTRLT-----------------------------DDVSKINEGIGDKIGMFFQAM
MDR1_CAEEL      HSGTLATKLF-----------------------------DNLERVKEGTGDKIGMAFQYL
MDR3_HUMAN      DTTELNTRLT-----------------------------DDISKISEGIGDKVGMFFQAV
MDR3_MOUSE      DVGELNTRLT-----------------------------DDVSKINEGIGDKIGMFFQAM
MDR3_CRIGR      GTTELNTRLT-----------------------------DDISKISEGIGDKVGMFFQAV
MDR3_CAEEL      TIGGLTQKMS-----------------------------SGIEKIKDGIGDKVGVLVGGV
                                                            .  * .**        

FUGU1_MDR_      STFITSFVIGFVHGWKLTLVILAISPVLGLSAALYSKVNISIHQW---------------
FUGU2_MDR_      TTFITAFIIGFTTGWKLTLVILAVSPALAISAAFFSKVLASFTSKEQTAYAKAGAVAEEV
MDR1_FUGU_      STFITSFVIGFVHGWKLTLVILAISPVLGLSAALYSKI----------------------
MRD3_FUGU_      TTFITAFIIGFTTGWKLTLVILAVSPALAISAAFFSKVLASFTSKEQTAYAKAGAVAEEV
MDR1_HUMAN      ATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSSFTDKELLAYAKAGAVAEEV
MDR1_LEIEN      SMGVIGYIAGFVFSWELTLMMIGMMPFIIVMAAIIGSIVSKITESSRKYFAKAGSLATEV
MDR1_MOUSE      TTFLAGFIIGFISGWKLTLVILAVSPLIGLSSALWAKVLTSFTNKELQAYAKAGAVAEEV
MDR1_RAT_       TTFSAGFIIGFISGWKLTLVILAVSPLIGLSSAMWAKVLTSFTNKELQAYAKAGAVAEEV
MDR1_CRIGR      ATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELQAYAKAGAVAEEV
MDR1_CAEEL      SQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEET
MDR3_HUMAN      ATFFAGFIVGFIRGWKLTLVIMAISPILGLSAAVWAKILSAFSDKELAAYAKAGAVAEEA
MDR3_MOUSE      ATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEV
MDR3_CRIGR      ATFFAGFIVGFIRGWKLTLVIMAISPILGLSAAVWAKILSTFSDKELAAYAKAGAVAEEA
MDR3_CAEEL      ATFISGVSIGFYMCWQLTLVMMITVPLQLGSMYLSAKHLNRATKNEMSAYSNAGGMANEV
                .         *   * ***...   *                                  

FUGU1_MDR_      -----TVFAFSGQRKAIKRYHKNLEDARDMGIKKGVAANTATGFSFLMIYLSYALAFWYG
FUGU2_MDR_      LSAIRTVFAFSGQTREIERYHKNLRDAKDVGVKKAISSNIAMGFTFLMIYLSYALAFWYG
MDR1_FUGU_      ------------------------------------------------------------
MRD3_FUGU_      LSAIRTVFAFSGQTREIERYHKNLRDAKDVGVKKAISSNIAMGFTFLMIYLSYALAFWYG
MDR1_HUMAN      LAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISIGAAFLLIYASYALAFWYG
MDR1_LEIEN      MENIRTVQAFGREDYELERFTKAVLYAQGRGIRKELASNLSAAVIMALMYVSYTVAFFFG
MDR1_MOUSE      LAAIRTVIAFGGQQKELERYNKNLEEAKNVGIKKAITASISIGIAYLLVYASYALAFWYG
MDR1_RAT_       LAAIRTVIAFGGQKKELERYNKNLEEAKRVGIKKAITANISIGIAYLLVYASYALAFWYG
MDR1_CRIGR      LAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYG
MDR1_CAEEL      ISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIG
MDR3_HUMAN      LGAIRTVIAFGGQNKELERYQKHLENAKEIGIKKAISANISMGIAFLLIYASYALAFWYG
MDR3_MOUSE      LAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYG
MDR3_CRIGR      LGAIRTVIAFGGQNKELERYQKHLENAKKIGIKKAISANISMGIAFLLIYASYALAFWYG
MDR3_CAEEL      IAGIRTVMAFNAQPFEINRYAHQLNEARRMGIRKAIILAICTAFPLMLMFTCMAVAFWYG
                                                                            

FUGU1_MDR_      TTLVLNKEYTIGNLLTVFFVVLYGAYIIGQASPNVQSFASARGAAYKVY----NIID---
FUGU2_MDR_      STLILNFEYTIGNLLTVFFVVLIGAFSVGQTSPNIQNFASARGAAYKVYSIIDNTGS---
MDR1_FUGU_      ------------------------------------------------------------
MRD3_FUGU_      STLILNFEYTIGNLLTVFFVVLIGAFSVGQTSPNIQNFASARGAAYKVYSIIDNVRRPLD
MDR1_HUMAN      TTLVLSGEYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYEIFKIIDNKPS---
MDR1_LEIEN      SYLVEWGRRDMADIISTFLAVLMGSFGLGFVAPSRTAFTESRAAAYEIFKAIDRVPP---
MDR1_MOUSE      TSLVLSNEYSIGEVLTVFFSILLGTFSIGHLAPNIEAFANARGAAFEIFKIIDNEPS---
MDR1_RAT_       TSLVLSNEYSIGQVLTVFFSILLGTFSIGHLAPNIEAFANARGAAYEIFKIIDNEPS---
MDR1_CRIGR      TSLVISKEYSIGQVLTVFFAVLIGAFSIGQASPNIEAFANARGAAYEIFNIIDNKPS---
MDR1_CAEEL      VGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKP----
MDR3_HUMAN      STLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANARGAAYVIFDIIDNNPK---
MDR3_MOUSE      TSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPS---
MDR3_CRIGR      STLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANARGAAYVIFDIIDNNPK---
MDR3_CAEEL      ATLAAAGAVSSGAVFAVFWAVLIGTRRLGEAAPHLGAITGARLAIHDIFKVIDHEPE---
                                                                            

FUGU1_MDR_      ------------------------------------------------------------
FUGU2_MDR_      -----------------------DGRLS--------------------------------
MDR1_FUGU_      ------------------------------------------------------------
MRD3_FUGU_      PGLVIILLKLASLLLEACRSVLVTARVSTWALWESALMQREDGFKPDFIKGDIEFKNIHF
MDR1_HUMAN      -----------------------IDSYS------------KSGHKPDNIKGNLEFRNVHF
MDR1_LEIEN      -----------------------VDIDAG-------------GVPVPGFKESIEFRNVRF
MDR1_MOUSE      -----------------------IDSFS------------TKGYKPDSIMGNLEFKNVHF
MDR1_RAT_       -----------------------IDSFS------------TKGHKPDSIMGNLEFKNVYF
MDR1_CRIGR      -----------------------IDSFS------------KNGYKPDNIKGNLEFKNIHF
MDR1_CAEEL      ----------------------VIDSSS------------KAGRKDMKIKGDITVENVHF
MDR3_HUMAN      -----------------------IDSFS------------ERGHKPDSIKGNLEFNDVHF
MDR3_MOUSE      -----------------------IDSFS------------KSGHKPDNIQGNLEFKNIHF
MDR3_CRIGR      -----------------------IDSFS------------ERGHKPDSIKGNLDFSDVHF
MDR3_CAEEL      -----------------------IKCTS------------SEGKIPEKIQGKLTFDGIEF
                                                                            

FUGU1_MDR_      ----H----ILNDMSFHVRNGQTIALVGSSGCGKSTTIQLLQRFYDPQKGSVNVRPHLWL
FUGU2_MDR_      ------HLQILNNMSLSVKSGQTIALVGSSGCGKSTTIQLLQRFYDPEEGAVFIDGHDIR
MDR1_FUGU_      ----------LNDMSFHVRNGQTIALVGSSGCGKSTTIQLLQRFYDPQKG----------
MRD3_FUGU_      NYPSRPEVKILNNMSLSVKSGQTIALVGSSGCGKSTTIQLLQRFYDPEEGAVFIDGHDIR
MDR1_HUMAN      SYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSVDGQDIR
MDR1_LEIEN      AYPTRPGMILFRDLSLKIKCGQKVAFSGASGCGKSSVIGLIQRFYDPIGGAVLVDGVRMR
MDR1_MOUSE      NYPSRSEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLEGVVSIDGQDIR
MDR1_RAT_       NYPSRSEVKILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPIEGEVSIDGQDIR
MDR1_CRIGR      SYPSRKDVQILKGLNLKVQSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGVVSIDGQDIR
MDR1_CAEEL      TYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVR
MDR3_HUMAN      SYPSRANVKILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIR
MDR3_MOUSE      SYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIR
MDR3_CRIGR      SYPSRANIKILKGLNLKVQSGQTVALVGNSGCGKTTTLQLLQRLYDPTEGTISIDGQDIR
MDR3_CAEEL      TYPTRPELKILKGVSFEVNPGETVALVGHSGCGKSTSIGLLMRFYNQCAGMIKLDGIPIQ
                             .   .  *. .*  * *****.. . *. * *    *          

FUGU1_MDR_      PY--------------------------------------LSLAPSRSNANIYIMISEQK
FUGU2_MDR_      SLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEIERATKESNAYDFIMNLPDK
MDR1_FUGU_      ----------------------------------------------------------SK
MRD3_FUGU_      SLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEIERATKESNAYDFIMNLPDK
MDR1_HUMAN      TINVRFLREIIGVVSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHK
MDR1_LEIEN      ELCLREWRDQIGIVSQEPNLFAGTMMENVRMGKPNATDEEVVEACRQANIHDTIMALPDR
MDR1_MOUSE      TINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQ
MDR1_RAT_       TINVRYLREIIGVVSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHK
MDR1_CRIGR      TINVRYLREIIGVVSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHK
MDR1_CAEEL      DINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNG
MDR3_HUMAN      NFNVNYLREIIGVVSQEPVLFSTTIAENICYGRGNVTMDEIKKAVKEANAYEFIMKLPQK
MDR3_MOUSE      TINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQ
MDR3_CRIGR      NFNVRYLREIIGVVSQEPVLFSTTIAENIRYGRGNVTMEEIKKAVKEANAYEFIMKLPQK
MDR3_CAEEL      EYNIRWLRSTIGIVQQEPIIFVATVAENIRMGDVLITDQDIEEACKMANAHEFICKLSDR
                                                                            

FUGU1_MDR_      FETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESETIVQAALDKVQTQ
FUGU2_MDR_      FETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESETIVQAALDKVQTQ
MDR1_FUGU_      FETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESETIVQAALDKVQTQ
MRD3_FUGU_      FETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESETIVQAALDK----
MDR1_HUMAN      FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDK----
MDR1_LEIEN      YDTPVGPVGSLLSGGQKQRIAIARALVKRPPILLLDEATSALDRKSEMEVQAALDQLIQ-
MDR1_MOUSE      FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDK----
MDR1_RAT_       FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDK----
MDR1_CRIGR      FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDK----
MDR1_CAEEL      YNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDK----
MDR3_HUMAN      FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDK----
MDR3_MOUSE      FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDK----
MDR3_CRIGR      FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDK----
MDR3_CAEEL      YDTVIGAGAVQLSGGQKQRVAIARAIVRKPQILLLDEATSALDTESERMVQTALDK----
                . * .*     ********.*****.*. * ************  **  ** ***.    

FUGU1_MDR_      T------RAEMMGNKETLLHCLLVYVSPFMVRLGRTTIVIAHRLSTIRNADIIAGFSNG-
FUGU2_MDR_      TCSPSPCRTQPLDLKDISQYGQYVFSG---VRLGRTTIVVAHRLSTIRNADIIAGFSNG-
MDR1_FUGU_      T------RAEMMGNKETLLHCLLVYVSPFMVRLGRTTIVIAHRLSTIRNADIIAGFSNG-
MRD3_FUGU_      ------------------------------VRLGRTTIVVAHRLSTIRNADIIAGFSNG-
MDR1_HUMAN      ------------------------------ARKGRTTIVIAHRLSTVRNADVIAGFDDG-
MDR1_LEIEN      -------------------------------RGGTTVVVIAHRLATIRDMDRIYYVKHDG
MDR1_MOUSE      ------------------------------AREGRTTIVIAHRLSTVRNADVIAGFDGG-
MDR1_RAT_       ------------------------------AREGRTTIVIAHRLSTVRNADVIAGFDGG-
MDR1_CRIGR      ------------------------------AREGRTTIVIAHRLSTVRNADIIAGFDGG-
MDR1_CAEEL      ------------------------------AAKGRTTIIIAHRLSTIRNADLIISCKNG-
MDR3_HUMAN      ------------------------------AREGRTTIVIAHRLSTVRNADVIAGFEDG-
MDR3_MOUSE      ------------------------------AREGRTTIVIAHRLSTVRNADVIAGFDGG-
MDR3_CRIGR      ------------------------------AREGRTTIVIAHRLSTVRNADVIAGFEDG-
MDR3_CAEEL      ------------------------------ASEGRTTLCIAHRLSTIRNASTHDELIS--
                                                 * * . .****.*.*            

FUGU1_MDR_      ----EIVEQGTHSQLMEIKGVYHGLVTMQSFQK-LEDLEDSDYEPW------VAEKSQLI
FUGU2_MDR_      ----KIVEQGTHSQLMEIKGVYHGLVTMQTFHN-VEEENTAMSELS------AGEKSPVE
MDR1_FUGU_      ----EIVEQGTHSQLMEIKGVYHGLVTMQSFQK-LEDLEDSDYEPW------VAEKSQLI
MRD3_FUGU_      ----KIVEQGTHSQLMEIKGVYHGLVTMQTFHN-VEEENTAMSELS------AGEKSPVE
MDR1_HUMAN      ----VIVEKGNHDELMKEKGIYFKLVTMQTAGNEVELENAADESKS------EIDALEMS
MDR1_LEIEN      AEGSRITESGTFDELLELDGEFAAVAKMQGVLAGDAKSGASVRDAK-----KASGHLGVI
MDR1_MOUSE      ----VIVEQGNHDELMREKGIYFKLVMTQTRGNEIEPGNNAYGSQS------DTDASELT
MDR1_RAT_       ----VIVEQGNHEELMKEKGIYFKLVMTQTRGNEIEPGNNAYESQS------DTGASELT
MDR1_CRIGR      ----VIVEQGNHEELMREKGIYFKLVMTQTAGNEIELGNEVGESKN------EIDNLDMS
MDR1_CAEEL      ----QVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLS
MDR3_HUMAN      ----VIVEQGSHSELMKKEGVYFKLVNMQTSGSQIQSEEFELND--------EKAATRMA
MDR3_MOUSE      ----VIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKD------EIDNLDMS
MDR3_CRIGR      ----VIVEQGSHSELMQKEGVYFKLVNMQTSGSQILSQEFEVELSE------EKAADGMT
MDR3_CAEEL      ------KDDGIYASMVKAQEIERAKEDTTLDDEEDEKTHRSFHRDS----VTSDEERELQ
                       . *    ..                                          . 

FUGU1_MDR_      ESFSQSSLQRRRSTRGSLLAVSEGTKEEKEK---FECDQD----NIEEDENVPPVSFFKV
FUGU2_MDR_      KTVSQSSIIRRKSTRGSSFAAQVLHSGDNIDGYYTSCVPDYSPIYTLRDEDVPDVSFFKV
MDR1_FUGU_      ESFSQSSLQRRRSTRGSLLAVSEGTKEEKEK---FECDQD----NIEEDENVPPVSFFKV
MRD3_FUGU_      KTVSQSSIIRRKSTRGSSFAASEGTK-EE---------------KTEEDEDVPDVSFFKV
MDR1_HUMAN      SNDSRSSLIRKRSTRRSVRGSQAQDRKLSTK--------------EALDESIPPVSFWRI
MDR1_LEIEN      LDEADLAQLDEDVPRTARQNVPIDEL-------------------AKWEVKHAKVGFLRL
MDR1_MOUSE      SEESKSPLIR-RSIYRSVHRKQDQERRLSMK--------------EAVDEDVPLVSFWRI
MDR1_RAT_       SEESKSPLIR-RSIRRSIHRRQDQERRLSSK--------------EDVDEDVPMVSFWQI
MDR1_CRIGR      SKDSASSLIRRRSTRRSIRGPHDQDRKLSTK--------------EALDEDVPPISFWRI
MDR1_CAEEL      RQASEMDDIMNRVRSSTIGSITNGPVIDEKEER-IGKDALSRLKQELEENNAQKTNLFEI
MDR3_HUMAN      PNGWKSRLFR-HSTQKNLKNSQMCQKSLDVET-------------DGLEANVPPVSFLKV
MDR3_MOUSE      SKDSGSSLIRRRSTRKSICGPHDQDRKLSTK--------------EALDEDVPPASFWRI
MDR3_CRIGR      PNGWKSHIFR-NSTKKSLKSSRAHHHRLDVDA-------------DELDANVPPVSFLKV
MDR3_CAEEL      QSLARDSTRLRQSMISTTTQVPEWEIENARE--------------EMIEEGAMEASLFDI
                                                                .          .

FUGU1_MDR_      MRYNVSEWPYILVGTICAMINGAMQPVFSIIFTEIIMVF---REKDK-EIIREKSSFFCI
FUGU2_MDR_      LHLNIPEWPYILVGLICATINGAMQPVFAILFSKIITVD---RDS----V-RRKSEFISL
MDR1_FUGU_      MRYNVSEWPYILVGTICAMINGAMQPVFSIIFTEIIMAA---------------------
MRD3_FUGU_      LHLNIPEWPYILVGLICATINGAMQPVFAILFSKIIT-----------------------
MDR1_HUMAN      MKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVF---TRIDDPETKRQNSNLFSL
MDR1_LEIEN      MRMNKDKAWAVALGILSSVVIGSARPASSIVMGHMLRVLGEYSATKDVEALRSGTNLYAP
MDR1_MOUSE      LNLNLSEWPYLLVGVLCAVINGCIQPVFAIVFSRIVGVF---SRDDDHETKRQNCNLFSL
MDR1_RAT_       LKLNISEWPYLVVGVLCAVINGCIQPVFAIVFSKIVGVF---SRDDDHETKQRNCNLFSL
MDR1_CRIGR      LKLNSSEWPYFVVGIFCAIVNGALQPAFSIIFSKVVGVF---TRNTDDETKRHDSNLFSL
MDR1_CAEEL      LYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVF---AGN--PADFLSQGHFWAL
MDR3_HUMAN      LKLNKTEWPYFVVGTVCAIANGGLQPAFSVIFSEIIAIF---GPGDD-AVKQQKCNIFSL
MDR3_MOUSE      LKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVF---TNGGPPETQRQNSNLFSL
MDR3_CRIGR      LKLNKTEWPYFVVGTVCAIVNGALQPAISIILSEMIAIF---GPGDD-AVKQQKCNLFSL
MDR3_CAEEL      FKYASPEMRNIIISLVFTLIRGFTWPAFSIVYGQLFKIL---SAGGD--DVSIKALLNSL
                            .    .   *   *  ..                              

FUGU1_MDR_      LFAVMGVVTFLTMFLQGFCFSKSGEILTLNLRLKAFISMMRQDLSWYDNPKNTVGALTTR
FUGU2_MDR_      MFVVIGCVSFVTMFLQ--------------------------DLSWYDNPQNTVGALTTR
MDR1_FUGU_      ------------------------------------------------------------
MRD3_FUGU_      ------------------------------------------DLSWYDNPQNTVGALTTR
MDR1_HUMAN      LFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTR
MDR1_LEIEN      LFIVFAVANFSGWILHG-FYGYAGEHLTTKIRVLLFRQIMRQDINFFDIPGRDAGTLAGM
MDR1_MOUSE      FFLVMGLISFVTYFFQGFTFGKAGEILTKRVRYMVFKSMLRQDISWFDDHKNSTGSLTTR
MDR1_RAT_       LFLVMGMISFVTYFFQGFTFGKAGEILTKRLRYMVFKSMLRQDISWFDDHKNTTGSLTTR
MDR1_CRIGR      LFLILGVISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDNPKNTTGALTTR
MDR1_CAEEL      MFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTR
MDR3_HUMAN      IFLFLGIISFFTFFLQGFTFGKAGEILTRRLRSMAFKAMLRQDMSWFDDHKNSTGALSTR
MDR3_MOUSE      LFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTR
MDR3_CRIGR      VFLGLGVLSFFTFFLQGFTFGKAGEILTTRLRSMAFKAMLRQDMSWFDDYKNSTGALSTR
MDR3_CAEEL      WFILLAFTGGISTLISGSLLGKAGETMSGRLRMDVFRNIMQQDASYFDDSRHNVGSLTSR
                                                                            

FUGU1_MDR_      LAADAAHVQGAAGVRLAVMTQNFANLGTSIIIS--FVYGWELTLLILAVVPILAVAGAAE
FUGU2_MDR_      LAADAAQVQGAAGVRLATIMQNFANLGTSIIIA--FVYGWELTLLILAVVPLIAAAGAAE
MDR1_FUGU_      ------------GVRLAVMTQNFANLGTSIIIS--FVYGWELTLLILAVVPILAVAGAAE
MRD3_FUGU_      LAADAAQVQGAAGVRLATIMQNFANLGTSIIIA--FVYGWELTLLILAVVPLIAAAGAAE
MDR1_HUMAN      LANDAAQVKGAIGSRLAVITQNIANLGTGIIIS--FIYGWQLTLLLLAIVPIIAIAGVVE
MDR1_LEIEN      LSGDCEAVHQLWGPSIGLKVQTMCIIASGLVVG--FIYQWKLALVALACMPLMIGCSLTR
MDR1_MOUSE      LASDASSVKGAMGARLAVVTQNVANLGTGVILS--LVYGWQLTLLLVVIIPLIVLGGIIE
MDR1_RAT_       LASDASNVKGAMGSRLAVVTQNVANLGTGIILSLVLVYGWQLTLLLVVIIPLIVLGGIIE
MDR1_CRIGR      LANDAGQVKGATGARLAVITQNIANLGTGIIIS--LIYGWQLTLLLLAIVPIIAIAGVVE
MDR1_CAEEL      LATDVPNLRTAIDFRFSTVITTLVSMVAGIGLA--FFYGWQMALLIIAILPIVAFGQYLR
MDR3_HUMAN      LATDAAQVQGATGTRLALIAQNIANLGTGIIIS--FIYGWQLTLLLLAVVPIIAVSGIVE
MDR3_MOUSE      LANDAAQVKGATGSRLAVIFQNIANLGTGIIIS--LIYGWQLTLLLLAIVPIIAIAGVVE
MDR3_CRIGR      LATDRAQVQGATGTRLALIAQNTANLGTGIIIS--FIYGWQLTLLLLSVVPFIAVSGIVE
MDR3_CAEEL      LATDAPNVQAAIDQRLAEVLTGIVSLFCGVGVA--FYYGWNMAPIGLATELLLVVVQSSV
                                         . . . .     * * .. . .     .       

FUGU1_MDR_      VKLLTGHAAEDKKELEMAGKIATEAIEN-------------VRTVCFLITFFLTLRRNSQ
FUGU2_MDR_      IKLLAGHAAKDKKELEKAGKVELKRVKFDLLQGCHCGIRKNKSVVSPCRSPQRPSRTNSQ
MDR1_FUGU_      VKLLTGHAAEDKKELEMAG-----------------------------------------
MRD3_FUGU_      IKLLAGHAAKDKKELEKAGKIATEAIEN--VRTVVSLSREPK-FECLYEENLRVPYKNSQ
MDR1_HUMAN      MKMLSGQALKDKKELEGAGKIATEAIEN--FRTVVSLTQEQK-FEHMYAQSLQVPYRNSL
MDR1_LEIEN      RLMINGYTKS--REGDTDDTIVTEALSN--VRTVTSLNMKEDCVEA-FQAALREEAPRSV
MDR1_MOUSE      MKLLSGQALKDKKQLEISGKIATEAIEN--FRTIVSLTREQK-FETMYAQSLQVPYRNAM
MDR1_RAT_       MKLLSGQALKDKKELEISGKIATEAIEN--FRTVVSLTREQK-FETMYAQSLQIPYRNAL
MDR1_CRIGR      MKMLSGQALKDKKELEGSGKIATEAIEN--FRTVVSLTREQK-FENMYAQSLQIPYRNAL
MDR1_CAEEL      GRRFTGKNVKSASEFADSGKIAIEAIEN--VRTVQALAREDTFYEN-FCEKLDIPHKEAI
MDR3_HUMAN      MKLLAGNAKRDKKELEAAGKIATEAIEN--IRTVVSLTQERK-FESMYVEKLYGPYRNSV
MDR3_MOUSE      MKMLSGQALKDKKELEGSGKIATEAIEN--FRTVVSLTREQK-FETMYAQSLQIPYRNAM
MDR3_CRIGR      MKMLAGNAKRDKKALEAAGKIATEAIEN--IRTVVSLTQERK-FESMYVEKLHEPYRNSV
MDR3_CAEEL      AQYLKFRGQRDMDSAIEASRLVTESISN--WKTVQALTKQEYMYDAFTAAS-KSPHRRAI
                                                                            

FUGU1_MDR_      KKAKIYGLTYSFSQAMIFFVYAACFRFGAWLIEAG--RMDVEGVFLVVMTMLYGAMAVGE
FUGU2_MDR_      KKAHVYGLTYSFSQAMIYFAYAACFRFGAWLIEAG--RMDVEGVFLVVSAVLYGAMAVGE
MDR1_FUGU_      ------------------------------------------------------------
MRD3_FUGU_      KKAHVYGLTYSFSQAMIYFAYAACFRFGAWLIEAG--RMDVEGVFLVVSAVLYGAMAVGE
MDR1_HUMAN      RKAHIFGITFSFTQAMMYFSYAGCFRFGAYLVAHK--LMSFEDVLLVFSAVVFGAMAVGQ
MDR1_LEIEN      RKGIIAGGIYGITQFIFYGVYALCFWYGSKLIDKG--EAEFKDVMIASMSILFGAQNAGE
MDR1_MOUSE      KKAHVFGITFSFTQAMMYFSYAACFRFGAYLVAQQ--LMTFENVMLVFSAVVFGAMAAGN
MDR1_RAT_       KKAHVFGITFAFTQAMIYFSYAACFRFGAYLVARE--LMTFENVMLVFSAVVFGAMAAGN
MDR1_CRIGR      KKAHVFGITFSFTQAMMYFSYAACFRFGAYLVARE--LMTFENVLLVFSAIVFGAMAVGQ
MDR1_CAEEL      KEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGF
MDR3_HUMAN      QKAHIYGITFSISQAFMYFSYAGCFRFGAYLIVNG--HMRFRDVILVFSAIVFGAVALGH
MDR3_MOUSE      KKAHVFGITFFFTQAMMYFSYAACFRFGAYLVTQQ--LMTFENVLLVFSAIVFGAMAVGQ
MDR3_CRIGR      QMAHIYGITFSISQAFMYFSYAGCFRFGAYLIVNG--HMRFRDVILVFSAIVFGAVALGH
MDR3_CAEEL      VRGLWQSLSFALAGSFVMWNFAIAYMFGLWLISNN--WSTPYTVFQVIEALNMASMSVML
                                                                            

FUGU1_MDR_      ANTYAPNFAKAKISASHLTMLINRQPAIDNLSEEEARLEKYDGNVLFEDVKFNYPSRPDV
FUGU2_MDR_      ANTFAPNYAKAKMAASYLMMLINKKPAIDNLSEEGTSPEKYDGNVHFEGVKFNYPSRPDV
MDR1_FUGU_      ------------K-------------------E------KYDGNVLFEDVKFNYPSRPDV
MRD3_FUGU_      ANTFAPNYAKAKMAASYLMMLINKKPAIDNLSEEGTSPEKYDGNVHFEGVKFNYPSRPDV
MDR1_HUMAN      VSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDI
MDR1_LEIEN      AGAFATKLADAEASAKRVFSVIDRVPDVD-IEQAGNKDLGEGCDIEYRNVQFIYSARPKQ
MDR1_MOUSE      TSSFAPDYAKAKVSASHIIRIIEKTPEIDSYSTEGLKPTLLEGNVKFNGVQFNYPTRPNI
MDR1_RAT_       TSSFAPDYAKAKVSASHIIGIIEKIPEIDSYSTEGLKPNWLEGNVKFNGVKFNYPTRPNI
MDR1_CRIGR      VSSFAPDYAKAKVSASHIIMIIEKVPSIDSYSTGGLKPNTLEGNVKFNEVVFNYPTRPDI
MDR1_CAEEL      ATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGEK-KKLYGKVIFKNVRFAYPERPEI
MDR3_HUMAN      ASSFAPDYAKAKLSAAHLFMLFERQPLIDSYSEEGLKPDKFEGNITFNEVVFNYPTRANV
MDR3_MOUSE      VSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGFVFNYPTRPSI
MDR3_CRIGR      ASSFAPDYAKAKLSAAHLFSLFERQPLIDSYSGEGLWPDKFEGSVTFNEVVFNYPTRANM
MDR3_CAEEL      AASYFPEYVRARISAGIMFTMIRQKSVIDNRGLTGDTP-TIKGNINMRGVYFAYPNRRRQ
                                                            .      * *  *   

FUGU1_MDR_      PVLQGLNLEVQKGETLALVGSSGCGKSTTIQLLERFYDPREGRVIMSQAELGDLSQLRSS
FUGU2_MDR_      TILQGLNLKVKKGETLALVGSSGCGKSTTIQLLERFYDPREG------------------
MDR1_FUGU_      PVLQGLNLEVQKGETLALVGSSGCGKSTTIQLLERFYDPREG------------------
MRD3_FUGU_      TILQGLNLKVKKGETLALVGSSGCGKSTTIQLLERFYDPREG------------------
MDR1_HUMAN      PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAG------------------
MDR1_LEIEN      VVLASVNMRFGDATSNGLIGQTGCGKSTVIQMLARFYERRSG------------------
MDR1_MOUSE      PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAG------------------
MDR1_RAT_       PVLQGLSFEVKKGQTLRLVGSSGCGKSTVVQLLERFYNPMAG------------------
MDR1_CRIGR      PVLQGLNLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAG------------------
MDR1_CAEEL      EILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGG------------------
MDR3_HUMAN      PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAG------------------
MDR3_MOUSE      PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAG------------------
MDR3_CRIGR      PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAG------------------
MDR3_CAEEL      LVLDGFNMSANFGQTVALVGPSGCGKSTTIQLIERYYDALCG------------------
                 .*           .  *.* .****** . .. *.*    *                  

FUGU1_MDR_      HAFSTLPTVYERRDMIIGLLQVHKLLDGVDVKQLNVHWLRSQIGIVSQEP----------
FUGU2_MDR_      ------------R----------VSLDGVNVKQLNIHWLRSQIGIVSQEPRYDTQAGDKG
MDR1_FUGU_      ------------R----------VLLDGVDVKQLNVHWLRSQIGIVSQEP----------
MRD3_FUGU_      ------------R----------VSLDGVNVKQLNIHWLRSQIGIVSQEP----------
MDR1_HUMAN      ----------------------KVLLDGKEIKRLNVQWLRAHLGIVSQEP----------
MDR1_LEIEN      ----------------------LISVNGRDLSSLDIAEWRRNISIVLQEP----------
MDR1_MOUSE      ----------------------SVFLDGKEIKQLNVQWLRAHLGIVSQEP----------
MDR1_RAT_       ----------------------TVFLDGKEIKQLNVQCVRA-LGIVSQEP----------
MDR1_CRIGR      ----------------------TVFLDGKEVNQLNVQWLRAHLGIVSQEP----------
MDR1_CAEEL      ----------------------EIFIDGSEIKTLNPEHTRSQIAIVSQEP----------
MDR3_HUMAN      ----------------------TVLLDGQEAKKLNVQWLRAQLGIVSQEP----------
MDR3_MOUSE      ----------------------SVFLDGKEIKQLNVQWLRAQLGIVSQEP----------
MDR3_CRIGR      ----------------------TVLLDGQEAKKLNIQWLRAQLGIVSQEP----------
MDR3_CAEEL      ----------------------SVKIDDSDIRDLSVKHLRDNIALVGQEP----------
                                         .       *     *  . .* ***          

FUGU1_MDR_      VLFDCSLAENIAYG----DNSRSVSMDEIVAAAKAANIHSFIEGLPQRYDTQAGDKGTQL
FUGU2_MDR_      TQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTE------------------------
MDR1_FUGU_      VLFDCSLAENIAYG----DNSRSVSMDEIVAAAKAANIHSFIEGLPQVAA----------
MRD3_FUGU_      VLFDCSLAENIAYG----DNSRSVSMDEIVACC---------------------------
MDR1_HUMAN      ILFDCSIAENIAYG----DNSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQL
MDR1_LEIEN      NLFSGTVRENIRYA------REGATDEEVEEAARLAHIHHEIIKWTDGYDTEVGYKGRAL
MDR1_MOUSE      ILFDCSIAENIAYG----DNSRAVSHEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQL
MDR1_RAT_       ILFDCSIAENIAYG----DNSRVVSHEEIVRAAREANIHQFIDSLPEKYNTRVGDKGTQL
MDR1_CRIGR      ILFDCSIAENIAYG----DNSRVVSQDEIERAAKEANIHQFIESLPDKYNTRVGDKGTQL
MDR1_CAEEL      TLFDCSIAENIIYG----LDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQL
MDR3_HUMAN      ILFDCSIAENIAYG----DNSRVVSQDEIVSAAKAANIHPFIETLPHKYETRVGDKGTQL
MDR3_MOUSE      ILFDCSIAENIAYG----DNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQL
MDR3_CRIGR      VLFDCSIAENIAYG----DNSRVVSQDEIVRAAKAANIHPFIETLPQKYKTRVGDKGTQL
MDR3_CAEEL      TLFNLTIRENITYG------LENITQDQVEKAATLANIHTFVMGLPDGYDTSVGASGGRL
                        . .                .   .                            

FUGU1_MDR_      SGGQKQRVAIARAIIRNPKLLLLDEATSALDTESEKVVQEALD--QARKGRTCIVVAHRL
FUGU2_MDR_      -------------------------S--------EKVVQEALD--QARKGRTCIVVAHRL
MDR1_FUGU_      ------------------------------------------------------------
MRD3_FUGU_      ------------------------------------------------------------
MDR1_HUMAN      SGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALD--KAREGRTCIVIAHRL
MDR1_LEIEN      SGGQKQRIAIARGLLRRPRLLLLDEATSALDSVTEAKVQEGIEAFQAKYKVTTVSIAHRL
MDR1_MOUSE      SGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALD--KAREGRTCIVIAHRL
MDR1_RAT_       SGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALD--KAREGRTCVVIAHRL
MDR1_CRIGR      SGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALD--KAREGRTCIVIAHRL
MDR1_CAEEL      SGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALD--RAREGRTCIVIAHRL
MDR3_HUMAN      SGGQKQRIAIARALIRQPQILLLDEATSALDTESEKVVQEALD--KAREGRTCIVIAHRL
MDR3_MOUSE      SGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALD--KAREGRTCIVIAHRL
MDR3_CRIGR      SGGQKQRLAIRRALIRQPRVLLLDEATSALDTESEKVVQEALD--KAREGRTCIVIAHRL
MDR3_CAEEL      SGGQKQRVAIARAIVRDPKILLLDEATSALDTESEKIVQEALD--KARLGRTCVVIAHRL
                                                                            

FUGU1_MDR_      STIQNADCIAVFQGGVVVEKGTHQQLIAKKGVYHMLVTKQMGYHSG
FUGU2_MDR_      STIQNADCIAVFQGGVVVEKGTHQQLIAKKGVYHMLVTKQMGYHND
MDR1_FUGU_      ----------------------------------------------
MRD3_FUGU_      ----------------------------------------------
MDR1_HUMAN      STIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQAGTKRQ
MDR1_LEIEN      TTIRHCDQIILLDSGCIIEQGSHEELMALGGEYKTRYDLYMSALS-
MDR1_MOUSE      STIQNADLIVVIENGKVKEHGTHQQLLAQKGIYFSMV--QAGAKRS
MDR1_RAT_       STIQNADLIVVIQNGQVKEHGTHQQLLAQKGIYFSMV--QAGAKRS
MDR1_CRIGR      STIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQAGAKR-
MDR1_CAEEL      NTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKLTQKQMTEKK-
MDR3_HUMAN      STIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQAGTQNL
MDR3_MOUSE      STIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQAGAKRS
MDR3_CRIGR      STIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVNIQAGAQNS
MDR3_CAEEL      STIQNADKIIVCRNGKAIEEGTHQTLLARRGLYYRLVEKQSS----

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Last modified: Tue, 13 July 1999, [email protected]